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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015903842.1_cds_XP_016453995.1_48064
CDS Infomation

[gene=LOC107778286] [db_xref=GeneID:107778286] [protein=myosin-12-like] [partial=3'] [protein_id=XP_016453995.1] [location=join(14086..14088,14173..14301,14801..14944,15036..15181,15274..15430,15521..15579,15683..15842,15928..16077,16164..16300,16387..16533,17750..17851,17934..17991,18088..18189,18276..18313,18472..18598,18674..18844,18935..19066,19179..19285,19553..19613,19736..19913,20202..20407,20690..20809,20923..21021,21335..>21388)] [gbkey=CDS]
Sequence

ATGGGAACTCCTGTAAACATCATAGTTGGATCCCAAGTGTGGATTGAGGATCCTGATGAT
GCTTGGATTGATGGAGAAGTTACAGAAATTAAGGGGTCAAATGCTACAGTAGTCACAACT
AATGGGAAGAAGACAGTTGCTCCTATTTCTAGCATATACCCAAAGGACACCGAAGCACCA
CCAGCTGGGGTTGATGACATGACCAAGTTAGCTTACCTACATGAGCCTGGGGTTCTGAAT
AACCTTGCCTGTCGGTATGCTCTAAATGAGATATATACTTACACGGGAAATATCCTAATT
GCGGTGAATCCATTTCGGAGACTTCCACATCTGTATGATATCCATATGATGCAGCAATAC
AAGGGAGCCCCATTTGGAGAGCTAAGTCCACATCTTTTTGCAGTGGCAGATGCCTGTTAT
AGGGCATTGATAAATGAACACGGGAGCCAATCTATCTTGGTCAGTGGAGAGAGTGGAGCT
GGCAAAACTGAGACAACGAAAATGTTAATGAGGTATCTCGCATTCATGGGTGGGCGCTCT
GGAACTGAAGGAAGAACAGTCGAGCAACAAGTTTTGGAGTCCAACCCAGTTTTAGAAGCA
TTTGGAAACGCAAAGACTGTGAAGAACAACAATTCCAGTCGTTTTGGTAAATTTGTTGAA
ATTCAATTCGATAAGCATGGAAAGATCTCTGGGGCTGCAGTTAGGACATATCTTCTTGAA
CGGTCACGTGTTTGCCAAGTCTCAGACCCAGAGAGAAACTACCATTGTTTTTACATGCTT
TGTGCTGCACCACCAGAGGATGTGAAAAGATACAAACTTGGAGATCCAAGATCATTTCAT
TATCTAAACCAAACTAACTGTTACGAAGTTGCAAACGTTGACGATGCACGGGAGTATCTT
GAAACCAGAAATGCTATGGATGTTGTTGGAATCGGTCCAGAGGAGCAGGAAGCTATATTC
CGTGTTGTAGCTGCAATACTCCATCTTGGAAACATCAACTTTGTGAAAGGAAAGGAGTTT
GATTCCTCCAAACTAAAAGATGACAAGTCACTTTTTCATCTGAAGACAGCTGCAGAGCTA
TTCATGTGTGACGAGAAGGCACTAGAAGACTCACTTTGTAAGCGTGTCATTGTAACTCCT
GATGGAAACATCACAAAACTACTGGATCCAGCAGCTGCAACCACAAGCAGGGATGCCCTG
GCAAAGACTGTATACTCCAGATTGTTCGACTGGCTTGTGGACAAGATAAACAGTTCAATT
GGACAAGATCCTGATGCAAAAAGCATAATTGGCGTCCTTGATATATATGGCTTTGAGAGC
TTCAAAATCAACAGTTTTGAGCAATTCTGCATCAACCTAACAAATGAGAAGTTGCAGCAG
CACTTTAACCAGCACGTATTCAAGATGGAACAAGAAGATTATACGACAGAAGAAATCAAC
TGGAGTTATGTGGAGTTTGTAGATAACCAAGATGTTTTAGATCTTATTGAGAAGAAACCT
GGAGGCATTATTGCTCTTCTTGATGAAGCTTGTATGTTCCCAAAATCAACTCATGAAACA
TTTGCCCAAAAGATGTACCAGACGTACAAAGCCCATAAGCGGTTTAGCAAGCCAAAACTT
GCTCGTACTGCATTTACAATCAATCATTACGCTGGTGATGTTACTTACCAGGCAGATCAC
TTCCTTGACAAAAACAAGGACTATGTGATAGCAGAATTTCAAGCTCTTCTGATGGACTCT
AAGTGCTTTTTCGTAGCAAAACTCTTCCCTCCATTGCCTGAAGAATCGTCCAAGCAGTCC
AAGTTCTCTTCCATCGGCACGCGGTTTAAGCAACAATTGCAATCTTTAATGGAGACCTTG
AGCACTACAGAGCCGCATTACATCAGATGTGTAAAGCCCAATACAGTTCTAAAGCCAGGA
ATATTTGAGAACATGAATGTATTAAACCAATTAAGATGTGGGGGTGTTTTAGAGGCGATC
AGGATAAGTTGTGCAGGATATCCAACAAAAAGAGTATTTGATGAGTTCCTTGACCGCTTT
GGAATGTTAGCTCCAGATGTTCTTGACGGATGTGATGAGAAGTCAGCATGCATTGCAATT
TGTGATAGGATGGGCTTAAAGGGTTATCAGATCGGGAAAACCAAAGTTTTTCTCAGAGCC
GGGCAGATGGCTGAATTAGATGCCAGAAGAACTGAAGTTCTAGCTCATGCTGCAAGGCGC
ATTCAGAGGCAAATTCGAACACATCTTACACGAAAAGAGTTCACAGCCCTAAGAAGAGCT
ACTATTCATTTCCAGAAACTTTGGAGAGCAAAACTTGCCAGAGTGCTGTATGAACAAATG
AGAAGGGAGGCTGCTTCAATCCGCATACAGAAACACGTGCGTTCTCATTCAGCAAGAAAA
TCTTACAAGGAATTGCAGGCAGCAGCTGTAGTCATTCAAACAGGGATGAGAGCAATGGCA
GCACGAAATGAATATAGGCAGAGGAGGAGAAATAAAGCAGCTAAAATAGTTCAGACTCAA
TGGAGAGGATTCCATGCCTTTTCAACTTATAAACAGAAGAAAAAAGCAAGTCTTTCACTT
CAATGTCTCTGGAGAGGCAGGTTGGCGAAGAAGGAGCTTCGAAAATTGAGGATGGCTGCA
AGAGATACAGGGGCACTTAAAGAAGCGAAGGATAAACTGGAAAAGCGTGTCGAGGAGTTA
ACGTGGCGATTAGACTTTGAAAAACACTTGAGGATTGATCTCGAAGAAGCAAAGGGGCAA
GAAATTTCAAAATTGCAAAAAGCCTTA

Peptide Sequence

PEP ID

XP_016453995.1
PEP Infomation

PREDICTED: myosin-12-like, partial [Nicotiana tabacum]
Sequence

MGTPVNIIVGSQVWIEDPDDAWIDGEVTEIKGSNATVVTTNGKKTVAPISSIYPKDTEAP
PAGVDDMTKLAYLHEPGVLNNLACRYALNEIYTYTGNILIAVNPFRRLPHLYDIHMMQQY
KGAPFGELSPHLFAVADACYRALINEHGSQSILVSGESGAGKTETTKMLMRYLAFMGGRS
GTEGRTVEQQVLESNPVLEAFGNAKTVKNNNSSRFGKFVEIQFDKHGKISGAAVRTYLLE
RSRVCQVSDPERNYHCFYMLCAAPPEDVKRYKLGDPRSFHYLNQTNCYEVANVDDAREYL
ETRNAMDVVGIGPEEQEAIFRVVAAILHLGNINFVKGKEFDSSKLKDDKSLFHLKTAAEL
FMCDEKALEDSLCKRVIVTPDGNITKLLDPAAATTSRDALAKTVYSRLFDWLVDKINSSI
GQDPDAKSIIGVLDIYGFESFKINSFEQFCINLTNEKLQQHFNQHVFKMEQEDYTTEEIN
WSYVEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKMYQTYKAHKRFSKPKL
ARTAFTINHYAGDVTYQADHFLDKNKDYVIAEFQALLMDSKCFFVAKLFPPLPEESSKQS
KFSSIGTRFKQQLQSLMETLSTTEPHYIRCVKPNTVLKPGIFENMNVLNQLRCGGVLEAI
RISCAGYPTKRVFDEFLDRFGMLAPDVLDGCDEKSACIAICDRMGLKGYQIGKTKVFLRA
GQMAELDARRTEVLAHAARRIQRQIRTHLTRKEFTALRRATIHFQKLWRAKLARVLYEQM
RREAASIRIQKHVRSHSARKSYKELQAAAVVIQTGMRAMAARNEYRQRRRNKAAKIVQTQ
WRGFHAFSTYKQKKKASLSLQCLWRGRLAKKELRKLRMAARDTGALKEAKDKLEKRVEEL
TWRLDFEKHLRIDLEEAKGQEISKLQKAL

Transcript Sequence

Gene sequence data has not been registered.